Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015941017.1_cds_XP_016485050.1_76010
CDS Infomation

[gene=LOC107805507] [db_xref=GeneID:107805507] [protein=glucan endo-1,3-beta-glucosidase 5-like] [protein_id=XP_016485050.1] [location=join(20395..20738,22043..23162)] [gbkey=CDS]
Sequence

ATGGGAATGATGGGGATGAAAGATGGTATTTGGATATCAATGATTTTGGGGTTTATGGTA
TTAGGAAAAGTGTATGGAATTGGAGCAAATTGGGGAACACAAGCAACACATCCTTTGCCA
CCAAACATAGTAGTGAAGCTGCTCAAGGACAATGGAATTCAGAAAGTGAAGCTGTTTGAT
GCAGATGCAGATATCTTTAAAGCACTGAGTGGGTCTGGAATTGAAGTAATGGTTGGAATC
CCAAATGAAATGCTTTATAGTTTAGCTAACAGTTTGGGTGCTGCTGAGAAATGGGTTGAG
AAGAATATCTCTTCATTTGTCTCTTCCAACAGTGTTGATATCAAATATGTTGCAGTTGGA
AATGAACCATTTCTATCTCAGTTTAATGGAACATTTCTGTCAACAACATTCCCAGCTATT
CAAAATATCCAGGCAGCCCTCATAAAAGCCGGTCTTGGCAATCGGGTGAAAGTAACTGTT
CCTCTCAATGCCGATGTATACGAGAGTTCGAGTGAAAAACCTTCAACAGGTGACTTCAGG
CAAGACATTCGTGATCTCATGGTGAACATTGTCAAGTTCTTGAATGACAATGGTGGTGCA
TTTACTGTCAATATCTATCCTTTTATAAGTCTCTACAATGACCCCAACTTTCCTGCTGAC
TATGCTTTCTTCGACGGATACTCAAATGCCATCGATGACAATGGGAAAATTTACAACAAC
GTGTTCGATGCAAACCACGATACCCTGCTTTGGGCGTTGCAGAAAAATGGATACCCAAAT
ATGTCGATCATAATAGGGGAAATCGGATGGCCAACAGACGGAGACAATAATGCAAACTTA
AAGGCTGCCCAGAGATTCAACCAAGGATTCATGACTCACATTTCAGGTGGAAAGGGGACT
CCAATGAGGCCTGGCCCTATAGATGCTTACCTGTTCAGCCTGATCGATGAGGATGCGAAA
AGCATCCAGCCTGGTAACTTCGAACGCCATTGGGGAATATTTTACTTCGATGGTACGGCT
AAATACAATCTTTCCCTGGGTGCAAACAATGGAGAATTAGTACCAGCAAGCGGTGTTCGT
TACCTGGCTCGCCAGTGGTGCGTGCTGTCGCTCTCGGCCAGTCTTGATGATCCACAGCTA
GCTGATAGTGTGGGCTATGCATGTTCACACGCTGATTGCACCAGCCTCGGACATGGGACA
TCGTGCGCTGATCTGGATACCCGTGGCAACATTTCATATGCATTCAACAGTTATTATCAG
GAAAACGATCAGCTACCTACTGCCTGCAAGTTTCCGAACCTTTCCATGGTCACAAACACA
GATCCATCACCACCGGGTGGAAACTGTAAATTCAAAATAATGATCCAAGCAAGTAGTCCT
AAAAACCATAAGAGTAATGCATTTACATCTAAGCCTGTCAATATGATGTTTTTGGTTATA
ATTTCTTTGTTGAGTGTTTTGTAA

Peptide Sequence

PEP ID

XP_016485050.1
PEP Infomation

PREDICTED: glucan endo-1,3-beta-glucosidase 5-like [Nicotiana tabacum]
Sequence

MGMMGMKDGIWISMILGFMVLGKVYGIGANWGTQATHPLPPNIVVKLLKDNGIQKVKLFD
ADADIFKALSGSGIEVMVGIPNEMLYSLANSLGAAEKWVEKNISSFVSSNSVDIKYVAVG
NEPFLSQFNGTFLSTTFPAIQNIQAALIKAGLGNRVKVTVPLNADVYESSSEKPSTGDFR
QDIRDLMVNIVKFLNDNGGAFTVNIYPFISLYNDPNFPADYAFFDGYSNAIDDNGKIYNN
VFDANHDTLLWALQKNGYPNMSIIIGEIGWPTDGDNNANLKAAQRFNQGFMTHISGGKGT
PMRPGPIDAYLFSLIDEDAKSIQPGNFERHWGIFYFDGTAKYNLSLGANNGELVPASGVR
YLARQWCVLSLSASLDDPQLADSVGYACSHADCTSLGHGTSCADLDTRGNISYAFNSYYQ
ENDQLPTACKFPNLSMVTNTDPSPPGGNCKFKIMIQASSPKNHKSNAFTSKPVNMMFLVI
ISLLSVL

Transcript Sequence

Gene sequence data has not been registered.